Maize (Zea mays) is an important crop grown worldwide. The maize ancestor went through a whole genome duplication around 5-12 million years ago. Its genome was published on Science in 2009 (ref). Maize genome has ~2.3 gigabases with over 32,000 genes predicted.

CDS target prediction

strict (score 3):           all_targets,   conserved_targets(ortho),  conserved_targets(homo)
moderate (score 4) :   all_targets,   conserved_targets(ortho),  conserved_targets(homo)
loose (score 5) :          all_targets,   conserved_targets(ortho),  conserved_targets(homo)

CDS targets (degradome)

ear_I       (GEO sample: GSM1160279)
ear_II      (GEO sample: GSM1160280)
ear_III     (GEO sample: GSM1160281)
ear_IV     (GEO sample: GSM1160282)

intergenic target prediction

strict (score 3):           all_targets,   conserved_targets
moderate (score 4) :   all_targets,   conserved_targets
loose (score 5) :          all_targets,   conserved_targets

intergenic eTM prediction

strict:  all_interg_eTMs,   conserved_interg_eTMs
loose: all_interg_eTMs,   conserved_interg_eTMs

Noncanonical CDS targets

ear_I       (GEO sample: GSM1160279)
ear_III     (GEO sample: GSM1160281)
ear_IV     (GEO sample: GSM1160282)