Tomato (Solanum lycopersicum) is a major crop grown worldwide. The tomato genome was published on Nature in 2012 (ref). Its genome assembly includes ~781 megabases of sequence.

CDS target prediction

strict (score 3):           all_targets,   conserved_targets(ortho),  conserved_targets(homo)
moderate (score 4) :   all_targets,   conserved_targets(ortho),  conserved_targets(homo)
loose (score 5) :          all_targets,   conserved_targets(ortho),  conserved_targets(homo)

CDS targets (degradome)

flower              (GEO sample: GSM553689)
green_fruit      (GEO sample: GSM553690)
leaf                  (GEO sample: GSM553688)
5DAP              (GEO sample: GSM1047560)  

intergenic target prediction

strict (score 3):           all_targets,   conserved_targets
moderate (score 4) :   all_targets,   conserved_targets
loose (score 5) :          all_targets,   conserved_targets

intergenic eTM prediction

strict:  all_interg_eTMs,   conserved_interg_eTMs
loose:  all_interg_eTMs,   conserved_interg_eTMs

Noncanonical CDS targets (degradome)

flower              (GEO sample: GSM553689)
green_fruit      (GEO sample: GSM553690)
leaf                  (GEO sample: GSM553688)
5DAP              (GEO sample: GSM1047560)