The first genome-sequenced cotton species is Gossypium raimonddi. G. raimonddi contributes the D genome to the allotetraploid cotton G. hirsutum (AD genome) that is the source of the majority of cotton production. G. raimonddi genome assembly represents ~750 megabases distributed on 13 pseudomolecules and 22 large scaffolds (phytozome). A recent cotton genome assembly produces ~775 MB sequences with ~570 MB incorporated into 13 pseudomolecules (Nature Genetics, 2012). RNA-seq data support 40,976 annotated genes.

CDS target prediction

strict (score 3):           all_targets,   conserved_targets(ortho),  conserved_targets(homo)
moderate (score 4) :   all_targets,   conserved_targets(ortho),  conserved_targets(homo)
loose (score 5) :          all_targets,   conserved_targets(ortho),  conserved_targets(homo)