Soybean (Glycine max) is an important crop that provides the source of plant proteins and vegetable oil. The soybean genome contains ~950 megabases with 46,430 predicted protein coding genes spread on twenty chromosomes (Nature, 2010). The ancestors of soybean went through whole genome duplications.

CDS target prediction

strict (score 3):           all_targets,   conserved_targets(ortho),  conserved_targets(homo)
moderate (score 4) :   all_targets,   conserved_targets(ortho),  conserved_targets(homo)
loose (score 5) :          all_targets,   conserved_targets(ortho),  conserved_targets(homo)

CDS targets (degradome)

cotyledon_EM      (GEO sample: GSM848963)
cotyledon_LM       (GEO sample: GSM848967)
cotyledon_MM      (GEO sample: GSM848965)
seedcoat_EM        (GEO sample: GSM848964)
seedcoat_MM        (GEO sample: GSM848966)

intergenic target prediction

strict (score 3):           all_targets,   conserved_targets
moderate (score 4) :   all_targets,   conserved_targets
loose (score 5) :          all_targets,   conserved_targets

intergenic eTM prediction

strict:  all_interg_eTMs,   conserved_interg_eTMs
loose: all_interg_eTMs,   conserved_interg_eTMs

Noncanonical CDS targets (degradome)

cotyledon_EM    (GEO sample: GSM848963)
cotyledon_LM     (GEO sample: GSM848967)
cotyledon_MM    (GEO sample: GSM848965)
seedcoat_EM      (GEO sample: GSM848964)
seedcoat_MM      (GEO sample: GSM848966)